IL_9WNQ_154

3D structure

PDB id

9WNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CCUUGAUG*CUUUAAUG

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNQ|1|b|C|2103
9WNQ|1|b|C|2104
9WNQ|1|b|U|2105
9WNQ|1|b|U|2106
9WNQ|1|b|G|2107
9WNQ|1|b|A|2108
9WNQ|1|b|U|2109
9WNQ|1|b|G|2110
*
9WNQ|1|b|C|2179
9WNQ|1|b|U|2180
9WNQ|1|b|U|2181
9WNQ|1|b|U|2182
9WNQ|1|b|A|2183
9WNQ|1|b|A|2184
9WNQ|1|b|U|2185
9WNQ|1|b|G|2186

Current chains

Chain b

23S ribosomal RNA

Nearby chains

Chain X

Transfer RNA; tRNA