IL_9WNQ_159

3D structure

PDB id

9WNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

CUUUGAAGUGUGG*CUGCAUGGAG

Length

23 nucleotides

Bulged bases

9WNQ|1|b|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9WNQ|1|b|C|2129
9WNQ|1|b|U|2130
9WNQ|1|b|U|2131
9WNQ|1|b|U|2132
9WNQ|1|b|G|2133
9WNQ|1|b|A|2134
9WNQ|1|b|A|2135
9WNQ|1|b|G|2136
9WNQ|1|b|U|2137
9WNQ|1|b|G|2138
9WNQ|1|b|U|2139
9WNQ|1|b|G|2140
9WNQ|1|b|G|2141
*
9WNQ|1|b|C|2150
9WNQ|1|b|U|2151
9WNQ|1|b|G|2152
9WNQ|1|b|C|2153
9WNQ|1|b|A|2154
9WNQ|1|b|U|2155
9WNQ|1|b|G|2156
9WNQ|1|b|G|2157
9WNQ|1|b|A|2158
9WNQ|1|b|G|2159

Current chains

Chain b

23S ribosomal RNA

Nearby chains

Chain K

Small ribosomal subunit protein uS11