IL_9WW4_149

3D structure

PDB id

9WW4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human 80S ribosome non-rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GCGG*CCU

Length

7 nucleotides

Bulged bases

9WW4|1|AA|C|4741

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9WW4_149 not in the Motif Atlas

Homologous match to IL_9H3G_134

Geometric discrepancy: 0.3267

The information below is about IL_9H3G_134

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_19025.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

36

Unit IDs

9WW4|1|AA|G|4740
9WW4|1|AA|C|4741
9WW4|1|AA|G|4742
9WW4|1|AA|G|4743
*
9WW4|1|AA|C|4957
9WW4|1|AA|C|4958
9WW4|1|AA|U|4959

Current chains

Chain AA

28S rRNA (3773-MER)

Nearby chains