IL_9WW4_221
3D structure
- PDB id
- 9WW4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.48 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 9WW4|1|BA|C|1153, 9WW4|1|BA|U|1155, 9WW4|1|BA|G|1157
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW4_221 not in the Motif Atlas
- Homologous match to IL_9H3G_205
- Geometric discrepancy: 0.1159
- The information below is about IL_9H3G_205
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82706.5
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
9WW4|1|BA|C|1091
9WW4|1|BA|G|1092
9WW4|1|BA|A|1093
*
9WW4|1|BA|U|1152
9WW4|1|BA|C|1153
9WW4|1|BA|U|1154
9WW4|1|BA|U|1155
9WW4|1|BA|U|1156
9WW4|1|BA|G|1157
9WW4|1|BA|G|1158
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain BJ
- 40S ribosomal protein S11
- Chain BQ
- 40S ribosomal protein S23
- Chain BV
- 40S ribosomal protein S2
- Chain BZ
- 40S ribosomal protein S13
- Chain Bb
- 40S ribosomal protein S15a
- Chain Be
- 40S ribosomal protein S27
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