IL_9WW5_049
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_049 not in the Motif Atlas
- Homologous match to IL_8GLP_052
- Geometric discrepancy: 0.118
- The information below is about IL_8GLP_052
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.5
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 50
Unit IDs
9WW5|1|AA|C|1431
9WW5|1|AA|G|1432
9WW5|1|AA|A|1433
9WW5|1|AA|G|1434
*
9WW5|1|AA|C|1450
9WW5|1|AA|G|1451
9WW5|1|AA|A|1452
9WW5|1|AA|G|1453
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AS
- 60S ribosomal protein L18
- Chain Ad
- 60S ribosomal protein L29
Coloring options: