IL_9WW5_080
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 9WW5|1|AA|G|2343
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_080 not in the Motif Atlas
- Homologous match to IL_8GLP_084
- Geometric discrepancy: 0.0541
- The information below is about IL_8GLP_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84227.2
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 20
Unit IDs
9WW5|1|AA|C|2290
9WW5|1|AA|G|2291
9WW5|1|AA|C|2292
*
9WW5|1|AA|G|2342
9WW5|1|AA|G|2343
9WW5|1|AA|U|2344
9WW5|1|AA|G|2345
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AF
- Large ribosomal subunit protein uL4
- Chain Ac
- Large ribosomal subunit protein uL15
- Chain Ag
- 60S ribosomal protein L32
- Chain As
- 60S ribosomal protein L28
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