IL_9WW5_101
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 9WW5|1|AA|G|3839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_101 not in the Motif Atlas
- Homologous match to IL_8GLP_107
- Geometric discrepancy: 0.0626
- The information below is about IL_8GLP_107
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28217.4
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 12
Unit IDs
9WW5|1|AA|A|2850
9WW5|1|AA|G|2851
9WW5|1|AA|U|2852
9WW5|1|AA|C|2853
9WW5|1|AA|G|2854
9WW5|1|AA|G|2855
*
9WW5|1|AA|C|3837
9WW5|1|AA|U|3838
9WW5|1|AA|G|3839
9WW5|1|AA|U|3840
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AE
- Large ribosomal subunit protein uL3
- Chain AX
- 60S ribosomal protein L23
Coloring options: