IL_9WW5_111
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CUGAAUG*CGCG
- Length
- 11 nucleotides
- Bulged bases
- 9WW5|1|AA|A|3712, 9WW5|1|AA|U|3713
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_111 not in the Motif Atlas
- Homologous match to IL_9SUM_080
- Geometric discrepancy: 0.5621
- The information below is about IL_9SUM_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9WW5|1|AA|C|3708
9WW5|1|AA|U|3709
9WW5|1|AA|G|3710
9WW5|1|AA|A|3711
9WW5|1|AA|A|3712
9WW5|1|AA|U|3713
9WW5|1|AA|G|3714
*
9WW5|1|AA|C|3739
9WW5|1|AA|G|3740
9WW5|1|AA|C|3741
9WW5|1|AA|G|3742
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AD
- 60S ribosomal protein L8
- Chain BA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: