IL_9WW5_148
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GAUUAU*AGAAUC
- Length
- 12 nucleotides
- Bulged bases
- 9WW5|1|AA|A|4708
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_148 not in the Motif Atlas
- Homologous match to IL_8GLP_164
- Geometric discrepancy: 0.0452
- The information below is about IL_8GLP_164
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
9WW5|1|AA|G|4680
9WW5|1|AA|A|4681
9WW5|1|AA|U|4682
9WW5|1|AA|U|4683
9WW5|1|AA|A|4684
9WW5|1|AA|U|4685
*
9WW5|1|AA|A|4705
9WW5|1|AA|G|4706
9WW5|1|AA|A|4707
9WW5|1|AA|A|4708
9WW5|1|AA|U|4709
9WW5|1|AA|C|4710
Current chains
- Chain AA
- 28S rRNA (3773-MER)
Nearby chains
- Chain AK
- 60S ribosomal protein L9
- Chain AQ
- 60S ribosomal protein L13a
- Chain Ao
- Ubiquitin-60S ribosomal protein L40
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