IL_9WW5_209
3D structure
- PDB id
- 9WW5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 80S ribosome rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GAAAAAA(PSU)(PSU)*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9WW5_209 not in the Motif Atlas
- Homologous match to IL_9H3G_194
- Geometric discrepancy: 0.2834
- The information below is about IL_9H3G_194
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_59049.5
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
9WW5|1|BA|G|807
9WW5|1|BA|A|808
9WW5|1|BA|A|809
9WW5|1|BA|A|810
9WW5|1|BA|A|811
9WW5|1|BA|A|812
9WW5|1|BA|A|813
9WW5|1|BA|PSU|814
9WW5|1|BA|PSU|815
*
9WW5|1|BA|A|849
9WW5|1|BA|C|850
9WW5|1|BA|C|851
9WW5|1|BA|G|852
9WW5|1|BA|C|853
9WW5|1|BA|A|854
9WW5|1|BA|G|855
9WW5|1|BA|C|856
Current chains
- Chain BA
- 18S rRNA (1740-MER)
Nearby chains
- Chain BB
- 40S ribosomal protein S4, X isoform
- Chain BJ
- 40S ribosomal protein S11
- Chain BX
- 40S ribosomal protein S9
- Chain Bb
- 40S ribosomal protein S15a
Coloring options: