IL_9XTC_046

3D structure

PDB id

9XTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class C, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9XTC_046 not in the Motif Atlas

Geometric match to IL_9AXU_061

Geometric discrepancy: 0.2438

The information below is about IL_9AXU_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75527.3

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

12

Unit IDs

9XTC|1|A|C|1407
9XTC|1|A|A|1408
9XTC|1|A|C|1409
*
9XTC|1|A|G|1491
9XTC|1|A|A|1492
9XTC|1|A|A|1493
9XTC|1|A|G|1494

Current chains

Chain A

RNA (1176-MER)

Nearby chains

Chain L

30S ribosomal protein S12