IL_9XTE_039

3D structure

PDB id

9XTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli delta lepA 30S ribosomal subunit class A, body domain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.24 Å

Loop

Sequence

GCA*UUCCC

Length

8 nucleotides

Bulged bases

9XTE|1|A|C|934

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9XTE_039 not in the Motif Atlas

Homologous match to IL_6CZR_410

Geometric discrepancy: 0.2794

The information below is about IL_6CZR_410

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47078.2

Basepair signature

cWW-cWS-L-cWW-L

Number of instances in this motif group

6

Unit IDs

9XTE|1|A|G|933
9XTE|1|A|C|934
9XTE|1|A|A|935
*
9XTE|1|A|U|1380
9XTE|1|A|U|1381
9XTE|1|A|C|1382
9XTE|1|A|C|1383
9XTE|1|A|C|1384

Current chains

Chain A

RNA (1026-MER)

Nearby chains