IL_9Y49_009
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AU*AAAUGU
- Length
- 8 nucleotides
- Bulged bases
- 9Y49|1|A5|A|149, 9Y49|1|A5|U|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Y49_009 not in the Motif Atlas
- Homologous match to IL_8GLP_008
- Geometric discrepancy: 0.2466
- The information below is about IL_8GLP_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10396.3
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 8
Unit IDs
9Y49|1|A5|A|121
9Y49|1|A5|U|122
*
9Y49|1|A5|A|147
9Y49|1|A5|A|148
9Y49|1|A5|A|149
9Y49|1|A5|U|150
9Y49|1|A5|G|151
9Y49|1|A5|U|152
Current chains
- Chain A5
- LSU-alpha rRNA (1722-MER)
Nearby chains
- Chain A8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain CG
- 60S ribosomal protein L7a
- Chain CN
- 60S ribosomal protein L15
Coloring options: