IL_9Y49_155
3D structure
- PDB id
- 9Y49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCAU*AGGCG
- Length
- 9 nucleotides
- Bulged bases
- 9Y49|1|A6|C|4720
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Y49_155 not in the Motif Atlas
- Homologous match to IL_9PN5_110
- Geometric discrepancy: 0.1792
- The information below is about IL_9PN5_110
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
9Y49|1|A6|C|4582
9Y49|1|A6|C|4583
9Y49|1|A6|A|4584
9Y49|1|A6|U|4585
*
9Y49|1|A6|A|4717
9Y49|1|A6|G|4718
9Y49|1|A6|G|4719
9Y49|1|A6|C|4720
9Y49|1|A6|G|4721
Current chains
- Chain A6
- LSU-beta rRNA (2069-MER)
Nearby chains
- Chain A5
- Large subunit ribosomal RNA; LSU rRNA
- Chain CB
- 60S ribosomal protein L3
- Chain CO
- 60S ribosomal protein L13a
Coloring options: