IL_9Y49_254

3D structure

PDB id

9Y49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome with P/E tRNA and eEF2 (rotated)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAUGC*GAGG

Length

9 nucleotides

Bulged bases

9Y49|1|B2|U|1397

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y49|1|B2|C|1395
9Y49|1|B2|A|1396
9Y49|1|B2|U|1397
9Y49|1|B2|G|1398
9Y49|1|B2|C|1399
*
9Y49|1|B2|G|1447
9Y49|1|B2|A|1448
9Y49|1|B2|G|1449
9Y49|1|B2|G|1450

Current chains

Chain B2

18S rRNA (1786-MER)

Nearby chains

Chain AQ

40S ribosomal protein S16

Chain AR

40S ribosomal protein S17

Chain AU

40S ribosomal protein S20

Chain Ag

Guanine nucleotide-binding protein subunit beta-2-like 1