IL_9Y4G_018

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUGAAAC*GUGGAUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A5|G|415
9Y4G|1|A5|U|416
9Y4G|1|A5|G|417
9Y4G|1|A5|A|418
9Y4G|1|A5|A|419
9Y4G|1|A5|A|420
9Y4G|1|A5|C|421
*
9Y4G|1|A8|G|13
9Y4G|1|A8|U|14
9Y4G|1|A8|G|15
9Y4G|1|A8|G|16
9Y4G|1|A8|A|17
9Y4G|1|A8|U|18
9Y4G|1|A8|C|19

Current chains

Chain A5

LSU-alpha rRNA

Chain A8

5.8S rRNA (157-MER)

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA

Chain CC

60S ribosomal protein L4

Chain CP

60S ribosomal protein L17

Chain Ce

60S ribosomal protein L32