IL_9Y4G_045

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGGG*CCGUG

Length

9 nucleotides

Bulged bases

9Y4G|1|A5|C|1379

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A5|C|1357
9Y4G|1|A5|G|1358
9Y4G|1|A5|G|1359
9Y4G|1|A5|G|1360
*
9Y4G|1|A5|C|1378
9Y4G|1|A5|C|1379
9Y4G|1|A5|G|1380
9Y4G|1|A5|U|1381
9Y4G|1|A5|G|1382

Current chains

Chain A5

LSU-alpha rRNA

Nearby chains

Chain CC

60S ribosomal protein L4

Chain CL

60S ribosomal protein L13

Chain CN

60S ribosomal protein L15

Chain Ca

60S ribosomal protein L27a