IL_9Y4G_063

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCGAAU*AAAC

Length

10 nucleotides

Bulged bases

9Y4G|1|A5|G|1741

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A5|G|1739
9Y4G|1|A5|C|1740
9Y4G|1|A5|G|1741
9Y4G|1|A5|A|1742
9Y4G|1|A5|A|1743
9Y4G|1|A5|U|1744
*
9Y4G|1|A5|A|1786
9Y4G|1|A5|A|1787
9Y4G|1|A5|A|1788
9Y4G|1|A5|C|1789

Current chains

Chain A5

LSU-alpha rRNA

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA

Chain A7

5S ribosomal RNA; 5S rRNA

Chain CD

60S ribosomal protein L5

Chain CI

60S ribosomal protein L10-like

Chain CT

60S ribosomal protein L21