IL_9Y4G_071

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUAAG*CCAUA

Length

10 nucleotides

Bulged bases

9Y4G|1|A5|U|2070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A5|U|1905
9Y4G|1|A5|U|1906
9Y4G|1|A5|A|1907
9Y4G|1|A5|A|1908
9Y4G|1|A5|G|1909
*
9Y4G|1|A5|C|2067
9Y4G|1|A5|C|2068
9Y4G|1|A5|A|2069
9Y4G|1|A5|U|2070
9Y4G|1|A5|A|2071

Current chains

Chain A5

LSU-alpha rRNA

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA

Chain A7

5S ribosomal RNA; 5S rRNA

Chain CF

60S ribosomal protein L7

Chain Ce

60S ribosomal protein L32

Chain Cf

60S ribosomal protein L35a