IL_9Y4G_076
3D structure
- PDB id
- 9Y4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 9Y4G|1|A5|C|1935, 9Y4G|1|A5|A|2041, 9Y4G|1|A5|U|2044
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y4G|1|A5|G|1933
9Y4G|1|A5|A|1934
9Y4G|1|A5|C|1935
9Y4G|1|A5|C|1936
9Y4G|1|A5|C|1937
9Y4G|1|A5|C|1938
9Y4G|1|A5|A|1939
9Y4G|1|A5|G|1940
9Y4G|1|A5|A|1941
9Y4G|1|A5|A|1942
9Y4G|1|A5|A|1943
9Y4G|1|A5|A|1944
*
9Y4G|1|A5|U|2038
9Y4G|1|A5|G|2039
9Y4G|1|A5|A|2040
9Y4G|1|A5|A|2041
9Y4G|1|A5|A|2042
9Y4G|1|A5|A|2043
9Y4G|1|A5|U|2044
9Y4G|1|A5|G|2045
9Y4G|1|A5|G|2046
9Y4G|1|A5|A|2047
9Y4G|1|A5|U|2048
9Y4G|1|A5|G|2049
9Y4G|1|A5|G|2050
9Y4G|1|A5|C|2051
9Y4G|1|A5|G|2052
9Y4G|1|A5|C|2053
Current chains
- Chain A5
- LSU-alpha rRNA
Nearby chains
- Chain A6
- Large subunit ribosomal RNA; LSU rRNA
- Chain A7
- 5S ribosomal RNA; 5S rRNA
- Chain CB
- 60S ribosomal protein L3
- Chain CF
- 60S ribosomal protein L7
- Chain CI
- 60S ribosomal protein L10-like
- Chain CO
- 60S ribosomal protein L13a
- Chain CS
- 60S ribosomal protein L18a
- Chain Cf
- 60S ribosomal protein L35a
- Chain Cm
- 60S ribosomal protein L40
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