IL_9Y4G_113

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUCAAAGU*AAUGAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A6|G|3714
9Y4G|1|A6|U|3715
9Y4G|1|A6|C|3716
9Y4G|1|A6|A|3717
9Y4G|1|A6|A|3718
9Y4G|1|A6|A|3719
9Y4G|1|A6|G|3720
9Y4G|1|A6|U|3721
*
9Y4G|1|A6|A|3732
9Y4G|1|A6|A|3733
9Y4G|1|A6|U|3734
9Y4G|1|A6|G|3735
9Y4G|1|A6|A|3736
9Y4G|1|A6|A|3737
9Y4G|1|A6|G|3738
9Y4G|1|A6|C|3739

Current chains

Chain A6

LSU-beta rRNA (2108-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain CA

60S ribosomal protein L8

Chain Cc

Transfer RNA; tRNA

Chain Ci

60S ribosomal protein L36

Chain Co

60S ribosomal protein L36a