IL_9Y4G_131

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUGUG*UUUUUG

Length

11 nucleotides

Bulged bases

9Y4G|1|A6|U|4437

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A6|U|4403
9Y4G|1|A6|U|4404
9Y4G|1|A6|G|4405
9Y4G|1|A6|U|4406
9Y4G|1|A6|G|4407
*
9Y4G|1|A6|U|4435
9Y4G|1|A6|U|4436
9Y4G|1|A6|U|4437
9Y4G|1|A6|U|4438
9Y4G|1|A6|U|4439
9Y4G|1|A6|G|4440

Current chains

Chain A6

LSU-beta rRNA (2108-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain Bb

Transfer RNA; tRNA

Chain CB

60S ribosomal protein L3

Chain CI

60S ribosomal protein L10-like