IL_9Y4G_138

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUG*CCAAG

Length

8 nucleotides

Bulged bases

9Y4G|1|A6|A|4488

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A6|U|4468
9Y4G|1|A6|U|4469
9Y4G|1|A6|G|4470
*
9Y4G|1|A6|C|4485
9Y4G|1|A6|C|4486
9Y4G|1|A6|A|4487
9Y4G|1|A6|A|4488
9Y4G|1|A6|G|4489

Current chains

Chain A6

LSU-beta rRNA (2108-MER)

Nearby chains

Chain A5

Large subunit ribosomal RNA; LSU rRNA

Chain CH

60S ribosomal protein L9

Chain CO

60S ribosomal protein L13a

Chain CV

60S ribosomal protein L23

Chain Cm

60S ribosomal protein L40