IL_9Y4G_152
3D structure
- PDB id
- 9Y4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGCCUCGGAUAG*UGCGGAGUGC
- Length
- 22 nucleotides
- Bulged bases
- 9Y4G|1|A6|C|4756, 9Y4G|1|A6|C|4757, 9Y4G|1|A6|U|4763, 9Y4G|1|A6|C|4871, 9Y4G|1|A6|G|4873
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y4G|1|A6|G|4754
9Y4G|1|A6|G|4755
9Y4G|1|A6|C|4756
9Y4G|1|A6|C|4757
9Y4G|1|A6|U|4758
9Y4G|1|A6|C|4759
9Y4G|1|A6|G|4760
9Y4G|1|A6|G|4761
9Y4G|1|A6|A|4762
9Y4G|1|A6|U|4763
9Y4G|1|A6|A|4764
9Y4G|1|A6|G|4765
*
9Y4G|1|A6|U|4869
9Y4G|1|A6|G|4870
9Y4G|1|A6|C|4871
9Y4G|1|A6|G|4872
9Y4G|1|A6|G|4873
9Y4G|1|A6|A|4874
9Y4G|1|A6|G|4875
9Y4G|1|A6|U|4876
9Y4G|1|A6|G|4877
9Y4G|1|A6|C|4878
Current chains
- Chain A6
- LSU-beta rRNA (2108-MER)
Nearby chains
- Chain A5
- Large subunit ribosomal RNA; LSU rRNA
- Chain CE
- 60S ribosomal protein L6
- Chain CH
- 60S ribosomal protein L9
- Chain CM
- 60S ribosomal protein L14
- Chain CO
- 60S ribosomal protein L13a
- Chain CS
- 60S ribosomal protein L18a
- Chain Cf
- 60S ribosomal protein L35a
Coloring options: