IL_9Y4G_161

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

9Y4G|1|A6|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|A6|U|5003
9Y4G|1|A6|C|5004
9Y4G|1|A6|G|5005
9Y4G|1|A6|U|5006
9Y4G|1|A6|A|5007
9Y4G|1|A6|C|5008
9Y4G|1|A6|G|5009
*
9Y4G|1|A6|U|5039
9Y4G|1|A6|U|5040
9Y4G|1|A6|G|5041
9Y4G|1|A6|A|5042
9Y4G|1|A6|A|5043
9Y4G|1|A6|A|5044

Current chains

Chain A6

LSU-beta rRNA (2108-MER)

Nearby chains

Chain CB

60S ribosomal protein L3

Chain CW

60S ribosomal protein L24

Chain Cd

60S ribosomal protein L31