IL_9Y4G_179

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUUAUGGU*AACGUC

Length

14 nucleotides

Bulged bases

9Y4G|1|B2|G|113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|B2|G|108
9Y4G|1|B2|U|109
9Y4G|1|B2|U|110
9Y4G|1|B2|A|111
9Y4G|1|B2|U|112
9Y4G|1|B2|G|113
9Y4G|1|B2|G|114
9Y4G|1|B2|U|115
*
9Y4G|1|B2|A|348
9Y4G|1|B2|A|349
9Y4G|1|B2|C|350
9Y4G|1|B2|G|351
9Y4G|1|B2|U|352
9Y4G|1|B2|C|353

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain AE

40S ribosomal protein S4, X isoform

Chain AI

40S ribosomal protein S8

Chain AL

40S ribosomal protein S11