IL_9Y4G_199

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

9Y4G|1|B2|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|B2|A|599
9Y4G|1|B2|G|600
9Y4G|1|B2|G|601
9Y4G|1|B2|G|602
9Y4G|1|B2|C|603
9Y4G|1|B2|A|604
9Y4G|1|B2|A|605
9Y4G|1|B2|G|606
9Y4G|1|B2|U|607
9Y4G|1|B2|C|608
*
9Y4G|1|B2|G|635
9Y4G|1|B2|C|636
9Y4G|1|B2|U|637

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain AC

40S ribosomal protein S2

Chain AD

40S ribosomal protein S3

Chain AJ

40S ribosomal protein S9

Chain Ae

40S ribosomal protein S30