IL_9Y4G_234

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GACAGGAUUG*CUCGAUUC

Length

18 nucleotides

Bulged bases

9Y4G|1|B2|G|1285

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|B2|G|1281
9Y4G|1|B2|A|1282
9Y4G|1|B2|C|1283
9Y4G|1|B2|A|1284
9Y4G|1|B2|G|1285
9Y4G|1|B2|G|1286
9Y4G|1|B2|A|1287
9Y4G|1|B2|U|1288
9Y4G|1|B2|U|1289
9Y4G|1|B2|G|1290
*
9Y4G|1|B2|C|1309
9Y4G|1|B2|U|1310
9Y4G|1|B2|C|1311
9Y4G|1|B2|G|1312
9Y4G|1|B2|A|1313
9Y4G|1|B2|U|1314
9Y4G|1|B2|U|1315
9Y4G|1|B2|C|1316

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain AK

40S ribosomal protein S10

Chain AM

40S ribosomal protein S12

Chain Ad

40S ribosomal protein S29

Chain Af

40S ribosomal protein S27a