IL_9Y4G_264
3D structure
- PDB id
- 9Y4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAG*CGAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Y4G_264 not in the Motif Atlas
- Homologous match to IL_9H3G_241
- Geometric discrepancy: 0.1455
- The information below is about IL_9H3G_241
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
9Y4G|1|B2|U|1733
9Y4G|1|B2|G|1734
9Y4G|1|B2|A|1735
9Y4G|1|B2|G|1736
*
9Y4G|1|B2|C|1798
9Y4G|1|B2|G|1799
9Y4G|1|B2|A|1800
9Y4G|1|B2|A|1801
Current chains
- Chain B2
- 18S ribosomal RNA
Nearby chains
- Chain AG
- 40S ribosomal protein S6
- Chain AI
- 40S ribosomal protein S8
- Chain CV
- 60S ribosomal protein L23
- Chain CW
- 60S ribosomal protein L24
Coloring options: