IL_9Y79_042
3D structure
- PDB id
- 9Y79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAG*UGUGCCUUCGGGAAC
- Length
- 19 nucleotides
- Bulged bases
- 9Y79|1|D|U|1030, 9Y79|1|D|C|1031, 9Y79|1|D|G|1032
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y79|1|D|G|1003
9Y79|1|D|A|1004
9Y79|1|D|A|1005
9Y79|1|D|G|1006
*
9Y79|1|D|U|1023
9Y79|1|D|G|1024
9Y79|1|D|U|1025
9Y79|1|D|G|1026
9Y79|1|D|C|1027
9Y79|1|D|C|1028
9Y79|1|D|U|1029
9Y79|1|D|U|1030
9Y79|1|D|C|1031
9Y79|1|D|G|1032
9Y79|1|D|G|1033
9Y79|1|D|G|1034
9Y79|1|D|A|1035
9Y79|1|D|A|1036
9Y79|1|D|C|1037
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain S
- Small ribosomal subunit protein uS14
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