IL_9Y79_052
3D structure
- PDB id
- 9Y79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAAGC*GCGGACC
- Length
- 12 nucleotides
- Bulged bases
- 9Y79|1|D|A|1257, 9Y79|1|D|A|1280, 9Y79|1|D|C|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y79|1|D|G|1255
9Y79|1|D|A|1256
9Y79|1|D|A|1257
9Y79|1|D|G|1258
9Y79|1|D|C|1259
*
9Y79|1|D|G|1276
9Y79|1|D|C|1277
9Y79|1|D|G|1278
9Y79|1|D|G|1279
9Y79|1|D|A|1280
9Y79|1|D|C|1281
9Y79|1|D|C|1282
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S3
- Chain NG
- Transcription termination/antitermination protein NusG
- Chain O
- Small ribosomal subunit protein uS9
- Chain P
- Small ribosomal subunit protein uS10
- Chain S
- Small ribosomal subunit protein uS14
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