IL_9Y79_054
3D structure
- PDB id
- 9Y79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Y79_054 not in the Motif Atlas
- Homologous match to IL_6CZR_164
- Geometric discrepancy: 0.2071
- The information below is about IL_6CZR_164
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Y79|1|D|C|1303
9Y79|1|D|G|1304
9Y79|1|D|G|1305
9Y79|1|D|A|1306
9Y79|1|D|U|1307
9Y79|1|D|U|1308
*
9Y79|1|D|A|1329
9Y79|1|D|U|1330
9Y79|1|D|G|1331
9Y79|1|D|A|1332
9Y79|1|D|A|1333
9Y79|1|D|G|1334
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain X
- Small ribosomal subunit protein uS13
Coloring options: