IL_9Y79_147

3D structure

PDB id

9Y79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

9Y79|1|a|A|2163, 9Y79|1|a|C|2164, 9Y79|1|a|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y79|1|a|G|2123
9Y79|1|a|G|2124
9Y79|1|a|G|2125
9Y79|1|a|A|2126
9Y79|1|a|G|2127
*
9Y79|1|a|C|2161
9Y79|1|a|G|2162
9Y79|1|a|A|2163
9Y79|1|a|C|2164
9Y79|1|a|C|2165
9Y79|1|a|U|2166
9Y79|1|a|U|2167
9Y79|1|a|G|2168
9Y79|1|a|A|2169
9Y79|1|a|A|2170
9Y79|1|a|A|2171
9Y79|1|a|U|2172
9Y79|1|a|A|2173
9Y79|1|a|C|2174
9Y79|1|a|C|2175

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA