IL_9YPT_238
3D structure
- PDB id
- 9YPT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIc
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 9YPT|1|9|C|1215, 9YPT|1|9|C|1216
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YPT|1|9|A|1214
9YPT|1|9|C|1215
9YPT|1|9|C|1216
9YPT|1|9|A|1217
*
9YPT|1|9|U|1681
9YPT|1|9|C|1682
9YPT|1|9|C|1683
9YPT|1|9|C|1684
9YPT|1|9|U|1685
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain 10
- MF mRNA
- Chain 11
- Transfer RNA; tRNA
- Chain 13
- Transfer RNA; tRNA
- Chain FF
- Ribosomal protein S5
- Chain QQ
- uS9
- Chain aa
- 40S ribosomal protein S26
- Chain cc
- Ribosomal protein S28
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