IL_9YPV_005
3D structure
- PDB id
- 9YPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IId
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUGAAUUU*AUUAGUCAG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YPV|1|5|C|30
9YPV|1|5|U|31
9YPV|1|5|G|32
9YPV|1|5|A|33
9YPV|1|5|A|34
9YPV|1|5|U|35
9YPV|1|5|U|36
9YPV|1|5|U|37
*
9YPV|1|5|A|44
9YPV|1|5|U|45
9YPV|1|5|U|46
9YPV|1|5|A|47
9YPV|1|5|G|48
9YPV|1|5|U|49
9YPV|1|5|C|50
9YPV|1|5|A|51
9YPV|1|5|G|52
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- 60S ribosomal protein L13
- Chain N
- Ribosomal protein L15
- Chain a
- 60S ribosomal protein L27a
- Chain j
- Ribosomal protein L37
- Chain o
- Large ribosomal subunit protein eL42
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