IL_9YPY_078
3D structure
- PDB id
- 9YPY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosome with accommodated A-site tRNA, Structure V
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUCAUCAG*CUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 9YPY|1|5|U|1930, 9YPY|1|5|C|1931, 9YPY|1|5|G|2055, 9YPY|1|5|A|2057
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YPY|1|5|C|1926
9YPY|1|5|U|1927
9YPY|1|5|C|1928
9YPY|1|5|A|1929
9YPY|1|5|U|1930
9YPY|1|5|C|1931
9YPY|1|5|A|1932
9YPY|1|5|G|1933
*
9YPY|1|5|C|2053
9YPY|1|5|U|2054
9YPY|1|5|G|2055
9YPY|1|5|G|2056
9YPY|1|5|A|2057
9YPY|1|5|G|2058
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein L9
- Chain M
- 60S ribosomal protein L14
- Chain O
- Large ribosomal subunit protein uL13
- Chain S
- 60S ribosomal protein L18a
- Chain m
- Ubiquitin A-52 residue ribosomal protein fusion product 1
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