IL_9YPY_233

3D structure

PDB id

9YPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome with accommodated A-site tRNA, Structure V

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAGUAUG*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPY|1|9|G|1168
9YPY|1|9|G|1169
9YPY|1|9|A|1170
9YPY|1|9|G|1171
9YPY|1|9|U|1172
9YPY|1|9|A|1173
9YPY|1|9|U|1174
9YPY|1|9|G|1175
*
9YPY|1|9|U|1186
9YPY|1|9|G|1187
9YPY|1|9|A|1188
9YPY|1|9|A|1189
9YPY|1|9|A|1190
9YPY|1|9|C|1191

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain XX

uS12

Chain n

eL41