IL_9YPZ_197
3D structure
- PDB id
- 9YPZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Vacant ribosome with P-site tRNA, substate 1, Structure Ia
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAUCAA*UGACCACG
- Length
- 14 nucleotides
- Bulged bases
- 9YPZ|1|9|U|361, 9YPZ|1|9|C|399, 9YPZ|1|9|C|400
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9YPZ|1|9|U|359
9YPZ|1|9|A|360
9YPZ|1|9|U|361
9YPZ|1|9|C|362
9YPZ|1|9|A|363
9YPZ|1|9|A|364
*
9YPZ|1|9|U|396
9YPZ|1|9|G|397
9YPZ|1|9|A|398
9YPZ|1|9|C|399
9YPZ|1|9|C|400
9YPZ|1|9|A|401
9YPZ|1|9|C|402
9YPZ|1|9|G|403
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain II
- 40S ribosomal protein S8
- Chain LL
- Ribosomal protein S11
- Chain XX
- uS12
Coloring options: