IL_9YQ0_181
3D structure
- PDB id
- 9YQ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Vacant ribosome with P-site tRNA, substate 2, Structure Ib
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUUAAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 9YQ0|1|9|U|44, 9YQ0|1|9|A|46
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9YQ0_181 not in the Motif Atlas
- Geometric match to IL_8GLP_191
- Geometric discrepancy: 0.0761
- The information below is about IL_8GLP_191
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_88082.4
- Basepair signature
- cWW-L-tSS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9YQ0|1|9|G|41
9YQ0|1|9|A|42
9YQ0|1|9|U|43
9YQ0|1|9|U|44
9YQ0|1|9|A|45
9YQ0|1|9|A|46
9YQ0|1|9|G|47
*
9YQ0|1|9|C|479
9YQ0|1|9|G|480
9YQ0|1|9|C|481
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain XX
- uS12
Coloring options: