IL_9YQ1_157
3D structure
- PDB id
- 9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Vacant ribosome with P-site tRNA, substate 3, Structure Ic
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UU*AAUG
- Length
- 6 nucleotides
- Bulged bases
- 9YQ1|1|5|A|4656, 9YQ1|1|5|U|4657
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9YQ1_157 not in the Motif Atlas
- Homologous match to IL_8GLP_163
- Geometric discrepancy: 0.0602
- The information below is about IL_8GLP_163
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.4
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
9YQ1|1|5|U|4641
9YQ1|1|5|U|4642
*
9YQ1|1|5|A|4655
9YQ1|1|5|A|4656
9YQ1|1|5|U|4657
9YQ1|1|5|G|4658
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain R
- Ribosomal protein L19
- Chain d
- eL31
Coloring options: