IL_9YQ1_192

3D structure

PDB id

9YQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vacant ribosome with P-site tRNA, substate 3, Structure Ic

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

9YQ1|1|9|U|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YQ1|1|9|G|145
9YQ1|1|9|G|146
9YQ1|1|9|A|147
9YQ1|1|9|U|148
9YQ1|1|9|A|149
9YQ1|1|9|A|150
9YQ1|1|9|C|151
*
9YQ1|1|9|G|167
9YQ1|1|9|C|168
9YQ1|1|9|U|169
9YQ1|1|9|A|170
9YQ1|1|9|A|171
9YQ1|1|9|U|172
9YQ1|1|9|A|173
9YQ1|1|9|C|174

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

40S ribosomal protein S6

Chain W

eL24

Chain YY

40S ribosomal protein S24