IL_9ZF3_012

3D structure

PDB id

9ZF3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 48

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZF3_012 not in the Motif Atlas

Geometric match to IL_9E6Q_087

Geometric discrepancy: 0.3867

The information below is about IL_9E6Q_087

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87767.4

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

19

Unit IDs

9ZF3|1|A|C|347
9ZF3|1|A|G|348
9ZF3|1|A|G|349
9ZF3|1|A|A|350
9ZF3|1|A|G|351
*
9ZF3|1|A|C|378
9ZF3|1|A|G|379
9ZF3|1|A|A|380
9ZF3|1|A|A|381
9ZF3|1|A|G|382

Current chains

Chain A

RNase P RNA

Nearby chains