IL_9ZF9_002

3D structure

PDB id

9ZF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 55

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UA*UAA

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZF9_002 not in the Motif Atlas

Geometric match to IL_7KGA_006

Geometric discrepancy: 0.3032

The information below is about IL_7KGA_006

Detailed Annotation

Single stack bend

Broad Annotation

Single stack bend

Motif group

IL_57267.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

9

Unit IDs

9ZF9|1|A|U|3
9ZF9|1|A|A|4
*
9ZF9|1|A|U|411
9ZF9|1|A|A|412
9ZF9|1|A|A|413

Current chains

Chain A

RNase P RNA

Nearby chains