IL_9ZGQ_002

3D structure

PDB id

9ZGQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RNase P RNA from Geobacillus stearothermophilus, conformer 8

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GC*GAC

Length

5 nucleotides

Bulged bases

9ZGQ|1|A|A|137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZGQ_002 not in the Motif Atlas

Homologous match to IL_1NBS_005

Geometric discrepancy: 0.3979

The information below is about IL_1NBS_005

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

175

Unit IDs

9ZGQ|1|A|G|114
9ZGQ|1|A|C|115
*
9ZGQ|1|A|G|136
9ZGQ|1|A|A|137
9ZGQ|1|A|C|138

Current chains

Chain A

RNase P RNA

Nearby chains