IL_9ZN2_011

3D structure

PDB id

9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

9ZN2|1|A|A|504, 9ZN2|1|A|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZN2|1|A|G|481
9ZN2|1|A|A|482
9ZN2|1|A|A|483
9ZN2|1|A|C|484
*
9ZN2|1|A|G|496
9ZN2|1|A|A|497
9ZN2|1|A|G|498
9ZN2|1|A|U|499
9ZN2|1|A|G|500
9ZN2|1|A|A|501
9ZN2|1|A|A|502
9ZN2|1|A|A|503
9ZN2|1|A|A|504
9ZN2|1|A|A|505
9ZN2|1|A|G|506
9ZN2|1|A|A|507
9ZN2|1|A|A|508
9ZN2|1|A|C|509

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain U

50S ribosomal protein L22

Chain W

50S ribosomal protein L24