IL_9ZN2_042
3D structure
- PDB id
- 9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUGCGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 9ZN2|1|A|C|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9ZN2_042 not in the Motif Atlas
- Homologous match to IL_8B0X_107
- Geometric discrepancy: 0.0503
- The information below is about IL_8B0X_107
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.5
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 32
Unit IDs
9ZN2|1|A|C|1208
9ZN2|1|A|U|1209
9ZN2|1|A|G|1210
9ZN2|1|A|C|1211
9ZN2|1|A|G|1212
9ZN2|1|A|A|1213
9ZN2|1|A|A|1214
9ZN2|1|A|G|1215
*
9ZN2|1|A|U|1234
9ZN2|1|A|G|1235
9ZN2|1|A|G|1236
9ZN2|1|A|A|1237
9ZN2|1|A|G|1238
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain S
- 50S ribosomal protein L20
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