IL_9ZN2_138
3D structure
- PDB id
- 9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGGCUAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9ZN2_138 not in the Motif Atlas
- Homologous match to IL_8B0X_023
- Geometric discrepancy: 0.0894
- The information below is about IL_8B0X_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 14
Unit IDs
9ZN2|1|a|C|504
9ZN2|1|a|G|505
9ZN2|1|a|G|506
9ZN2|1|a|C|507
9ZN2|1|a|U|508
9ZN2|1|a|A|509
9ZN2|1|a|A|510
9ZN2|1|a|C|511
*
9ZN2|1|a|G|540
9ZN2|1|a|G|541
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain d
- Small ribosomal subunit protein uS4
- Chain l
- Small ribosomal subunit protein uS12
- Chain x
- Translation initiation factor IF-2
Coloring options: