IL_9ZTL_014

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GAUUAG*CGACGAUC

Length

14 nucleotides

Bulged bases

9ZTL|1|A|U|244, 9ZTL|1|A|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZTL_014 not in the Motif Atlas

Homologous match to IL_6CZR_123

Geometric discrepancy: 0.1605

The information below is about IL_6CZR_123

Detailed Annotation

Kink-turn with non-sequential stacking

Broad Annotation

Kink-turn

Motif group

IL_46174.2

Basepair signature

cWW-cSS-tSS-tSH-L-cWW-tHW-cWW

Number of instances in this motif group

6

Unit IDs

9ZTL|1|A|G|242
9ZTL|1|A|A|243
9ZTL|1|A|U|244
9ZTL|1|A|U|245
9ZTL|1|A|A|246
9ZTL|1|A|G|247
*
9ZTL|1|A|C|277
9ZTL|1|A|G|278
9ZTL|1|A|A|279
9ZTL|1|A|C|280
9ZTL|1|A|G|281
9ZTL|1|A|A|282
9ZTL|1|A|U|283
9ZTL|1|A|C|284

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain Q

30S ribosomal protein S17