3D structure

PDB id
9ZTL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex
Experimental method
ELECTRON MICROSCOPY
Resolution
2.91 Å

Loop

Sequence
CAG*CAGAAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9ZTL_021 not in the Motif Atlas
Geometric match to IL_8B0X_020
Geometric discrepancy: 0.1269
The information below is about IL_8B0X_020
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_02111.1
Basepair signature
cWW-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

9ZTL|1|A|C|440
9ZTL|1|A|A|441
9ZTL|1|A|G|442
*
9ZTL|1|A|C|492
9ZTL|1|A|A|493
9ZTL|1|A|G|494
9ZTL|1|A|A|495
9ZTL|1|A|A|496
9ZTL|1|A|G|497

Current chains

Chain A
16S rRNA

Nearby chains

Chain D
30S ribosomal protein S4

Coloring options:


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