IL_9ZTL_023

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZTL_023 not in the Motif Atlas

Homologous match to IL_6CZR_406

Geometric discrepancy: 0.599

The information below is about IL_6CZR_406

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_26564.1

Basepair signature

cWW-L-R-tWH-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

9ZTL|1|A|G|450
9ZTL|1|A|A|451
9ZTL|1|A|A|452
9ZTL|1|A|G|453
9ZTL|1|A|G|454
9ZTL|1|A|G|455
*
9ZTL|1|A|C|477
9ZTL|1|A|A|478
9ZTL|1|A|U|479
9ZTL|1|A|U|480
9ZTL|1|A|G|481
9ZTL|1|A|A|482
9ZTL|1|A|C|483

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16